STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20033.1Hypothetical protein; COG0629 Single-stranded DNA-binding protein. (154 aa)    
Predicted Functional Partners:
EAR18576.1
COG0587 DNA polymerase III, alpha subunit.
  
 
 0.949
dnaX
DNA polymerase, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
    
 
 0.927
EAR19415.1
COG0629 Single-stranded DNA-binding protein.
     
 0.892
priA
Primosomal protein N' (replication factor Y); Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.
    
 
 0.882
rnhA
Possible ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
    
 
 0.817
EAR17959.1
Phage SPO1 DNA polymerase-related protein; COG1573 Uracil-DNA glycosylase.
    
   0.790
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
  
 0.777
EAR18803.1
Hypothetical protein.
 
     0.774
EAR20004.1
Hypothetical protein.
  
     0.772
EAR18892.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.