STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20047.1COG1266 Predicted metal-dependent membrane protease. (441 aa)    
Predicted Functional Partners:
EAR20045.1
COG0044 Dihydroorotase and related cyclic amidohydrolases.
  
    0.601
EAR20046.1
Possible alpha-ribazole-5'-P phosphatase; COG0406 Fructose-2,6-bisphosphatase; Belongs to the phosphoglycerate mutase family.
  
    0.594
EAR18234.1
Hypothetical protein; COG2214 DnaJ-class molecular chaperone.
  
     0.547
EAR20048.1
Hypothetical protein.
       0.547
clpS-2
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
 
    0.522
EAR20031.1
Hypothetical protein.
  
     0.508
EAR18666.1
Hypothetical protein.
  
     0.500
EAR20049.1
Putative peptidoglycan synthetase (pbp transpeptidase domain); COG0768 Cell division protein FtsI/penicillin-binding protein 2.
       0.464
EAR19054.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
  
     0.446
EAR17476.1
Hypothetical protein; COG0720 6-pyruvoyl-tetrahydropterin synthase.
  
     0.435
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.