STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAR20093.1Hypothetical protein. (261 aa)    
Predicted Functional Partners:
EAR20100.1
COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.958
EAR20101.1
COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.958
EAR20095.1
COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.930
EAR20102.1
COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein.
 
 
 
 0.923
EAR20098.1
Putative carboxysome structural peptide CsoS2.
 
   
 0.794
EAR20099.1
Putative carboxysome shell polypeptide CsoS3.
 
   
 0.787
EAR20106.1
Hypothetical protein; COG2154 Pterin-4a-carbinolamine dehydratase.
  
     0.760
EAR19002.1
Carbohydrate kinase, FGGY family protein; COG1070 Sugar (pentulose and hexulose) kinases.
  
     0.671
EAR20092.1
Hypothetical protein.
       0.546
EAR20097.1
COG4451 Ribulose bisphosphate carboxylase small subunit.
 
 
 
 0.501
Your Current Organism:
Synechococcus sp. WH 7805
NCBI taxonomy Id: 59931
Other names: S. sp. WH 7805, Synechococcus WH7805, Synechococcus sp. (strain WH7805), Synechococcus sp. WH7805
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.