STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBRA_03785GOLD domain-containing protein. (202 aa)    
Predicted Functional Partners:
FIBRA_02259
GOLD domain-containing protein.
   
0.999
FIBRA_03863
GOLD domain-containing protein.
   
 0.994
FIBRA_00457
GOLD domain-containing protein.
   
0.987
FIBRA_01120
Uncharacterized protein.
   
 0.916
FIBRA_04827
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
    
 0.894
FIBRA_06912
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
   
 0.892
FIBRA_08267
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.882
FIBRA_05802
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
 0.878
FIBRA_08477
Uncharacterized protein.
   
 0.852
FIBRA_04565
Uncharacterized protein.
   
  0.849
Your Current Organism:
Fibroporia radiculosa
NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.