STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBRA_02764Uncharacterized protein. (892 aa)    
Predicted Functional Partners:
FIBRA_02763
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.990
FIBRA_06298
Uncharacterized protein.
  
 0.974
FIBRA_03929
Tyrosine--tRNA ligase.
  
 0.969
FIBRA_01231
DALR_1 domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.968
FIBRA_00179
Lysine--tRNA ligase.
  
 0.946
FIBRA_00446
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
0.934
FIBRA_02534
GST C-terminal domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.928
FIBRA_07804
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.928
FIBRA_00943
tRNA-synt_1c domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.928
FIBRA_02501
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.904
Your Current Organism:
Fibroporia radiculosa
NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa
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