STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBRA_02017BAH domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family. (671 aa)    
Predicted Functional Partners:
FIBRA_04380
YDG domain-containing protein.
  
 0.917
FIBRA_04034
YDG domain-containing protein.
  
 0.913
FIBRA_07450
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
   0.847
FIBRA_03808
Uncharacterized protein.
    
  0.838
FIBRA_00077
Spindle pole body component.
    
 0.810
FIBRA_05998
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
   
 0.799
FIBRA_03297
Spindle pole body component.
   
 0.797
FIBRA_01750
Histone H3; Belongs to the histone H3 family.
    
 0.795
FIBRA_05312
Histone domain-containing protein.
    
 0.795
FIBRA_03496
Histone domain-containing protein.
    
 0.795
Your Current Organism:
Fibroporia radiculosa
NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa
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