STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBRA_00459Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
FIBRA_06904
Uncharacterized protein; Belongs to the SKP1 family.
    
  0.601
FIBRA_01448
JAB_MPN domain-containing protein.
    
  0.536
FIBRA_03188
Uncharacterized protein.
    
  0.533
FIBRA_00291
Uncharacterized protein.
    
  0.533
FIBRA_04304
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. Belongs to the tubulin family.
    
  0.518
FIBRA_02239
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
  0.518
FIBRA_00729
GRIP domain-containing protein.
    
  0.511
FIBRA_06205
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.510
FIBRA_00270
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
    
  0.510
FIBRA_02060
Uncharacterized protein.
    
  0.492
Your Current Organism:
Fibroporia radiculosa
NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa
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