STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIBRA_00328FYVE-type domain-containing protein. (359 aa)    
Predicted Functional Partners:
FIBRA_05017
Protein kinase domain-containing protein.
    
 0.718
FIBRA_02456
Uncharacterized protein.
    
 0.718
FIBRA_08711
Uncharacterized protein.
    
 0.718
FIBRA_04316
Uncharacterized protein.
    
 0.718
FIBRA_08418
MCU domain-containing protein.
     
 0.699
FIBRA_05695
Prohibitin.
    
  0.672
FIBRA_06600
Uncharacterized protein.
    
 
 0.663
FIBRA_01056
Uncharacterized protein.
    
 0.659
FIBRA_04912
PHB domain-containing protein.
    
  0.656
FIBRA_00806
Uncharacterized protein.
    
 
 0.650
Your Current Organism:
Fibroporia radiculosa
NCBI taxonomy Id: 599839
Other names: Antrodia radiculosa, F. radiculosa
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.