STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mrdAPutative penicillin-binding protein 2; COG0768; Protein involved in peptidoglycan biosynthetic process. (636 aa)    
Predicted Functional Partners:
mrdB
Cell cycle protein; COG0772; Protein involved in regulation of cell shape; Belongs to the SEDS family.
 
 0.989
mreB
Putative rod shape-determining protein MreB; COG1077; Protein involved in regulation of cell shape.
 
 
 
 0.930
ftsI
FtsI-like transpeptidase/penicillin-binding protein; COG0768.
  
  
 
0.923
mreC
Putative rod shape-determining protein MreC; COG1792.
 
 
 0.922
ftsQ
Cell division protein FtsQ.
 
 
 0.850
BPLAN_019
Conserved hypothetical protein.
 
     0.816
ftsW
Rod shape-determining protein rodA; COG0772; Protein involved in cell division; Belongs to the SEDS family.
 
 
 0.786
mrcA
Bifunctional transglycosylase/transpeptidase penicillin-binding protein; COG5009.
 
 
 
 0.753
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
  
 0.572
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine; COG0801.
       0.521
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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