STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrfCMolybdopterin oxidoreductase, iron-sulfur binding subunit; COG0437. (976 aa)    
Predicted Functional Partners:
nrfD
Molybdopterin oxidoreductase membrane subunit; COG5557.
 
 
 0.998
BPLAN_063
Conserved hypothetical protein.
 
   0.995
BPLAN_061
Conserved hypothetical protein; COG0436.
 
   0.984
BPLAN_062
Conserved hypothetical protein; COG2010.
 
   0.984
BPLAN_058
COG3474.
 
   0.979
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
   0.819
ccoP
ccoP cytochrome c oxidase, cbb3-type, subunit III; COG2010.
  
   0.681
BPLAN_226
ccoN/ccoO cytochrome c oxidase, cbb3-type, subunit I and II; COG3278; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.580
BPLAN_057
Putative peptidase; COG0612.
       0.479
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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