ybeY protein (Blattabacterium sp. BPLAN) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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experimentally determined

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Your Current Organism:

Blattabacterium sp. BPLAN

NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
era	ybeY	BPLAN_570	BPLAN_108	Putative GTP-binding protein (cell growth-related); An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.675
gcvP	ybeY	BPLAN_025	BPLAN_108	COG1003; Protein involved in glycine decarboxylation via glycine cleavage system; Belongs to the GcvP family.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.799
gidA	menE	BPLAN_107	BPLAN_365	Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.	Putative O-succinylbenzoate--CoA ligase; COG0318.	0.630
gidA	ybeY	BPLAN_107	BPLAN_108	Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.820
menE	gidA	BPLAN_365	BPLAN_107	Putative O-succinylbenzoate--CoA ligase; COG0318.	Glucose-inhibited division protein A; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.	0.630
menE	rplK	BPLAN_365	BPLAN_460	Putative O-succinylbenzoate--CoA ligase; COG0318.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.695
menE	rplQ	BPLAN_365	BPLAN_373	Putative O-succinylbenzoate--CoA ligase; COG0318.	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	0.703
menE	rplU	BPLAN_365	BPLAN_607	Putative O-succinylbenzoate--CoA ligase; COG0318.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.703
menE	rpsQ	BPLAN_365	BPLAN_390	Putative O-succinylbenzoate--CoA ligase; COG0318.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.679
menE	sodA	BPLAN_365	BPLAN_347	Putative O-succinylbenzoate--CoA ligase; COG0318.	Superoxide dismutase, iron/manganese-dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.682
menE	ybeY	BPLAN_365	BPLAN_108	Putative O-succinylbenzoate--CoA ligase; COG0318.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.616
rplK	menE	BPLAN_460	BPLAN_365	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Putative O-succinylbenzoate--CoA ligase; COG0318.	0.695
rplK	rplQ	BPLAN_460	BPLAN_373	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	0.989
rplK	rplU	BPLAN_460	BPLAN_607	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.989
rplK	rpsQ	BPLAN_460	BPLAN_390	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.990
rplK	sodA	BPLAN_460	BPLAN_347	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Superoxide dismutase, iron/manganese-dependent; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.	0.727
rplK	ybeY	BPLAN_460	BPLAN_108	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.	0.652
rplQ	menE	BPLAN_373	BPLAN_365	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	Putative O-succinylbenzoate--CoA ligase; COG0318.	0.703
rplQ	rplK	BPLAN_373	BPLAN_460	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.989
rplQ	rplU	BPLAN_373	BPLAN_607	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.979

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