rpmG protein (Blattabacterium sp. BPLAN) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Your Current Organism:

Blattabacterium sp. BPLAN

NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplQ	BPLAN_409	BPLAN_373	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	0.994
rplM	rpmA	BPLAN_409	BPLAN_606	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L27; COG0211; Belongs to the bacterial ribosomal protein bL27 family.	0.992
rplM	rpmB	BPLAN_409	BPLAN_115	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L28; COG0227; Belongs to the bacterial ribosomal protein bL28 family.	0.990
rplM	rpmG	BPLAN_409	BPLAN_114	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L33; COG0267; Belongs to the bacterial ribosomal protein bL33 family.	0.992
rplM	rpsC	BPLAN_409	BPLAN_393	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Putative 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.998
rplM	rpsE	BPLAN_409	BPLAN_382	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.998
rplM	rpsH	BPLAN_409	BPLAN_385	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.995
rplM	rpsJ	BPLAN_409	BPLAN_400	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.996
rplM	rpsK	BPLAN_409	BPLAN_376	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.994
rplM	rpsR	BPLAN_409	BPLAN_302	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.992
rplQ	rplM	BPLAN_373	BPLAN_409	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.994
rplQ	rpmA	BPLAN_373	BPLAN_606	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein L27; COG0211; Belongs to the bacterial ribosomal protein bL27 family.	0.981
rplQ	rpmB	BPLAN_373	BPLAN_115	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	50S ribosomal protein L28; COG0227; Belongs to the bacterial ribosomal protein bL28 family.	0.968
rplQ	rpmG	BPLAN_373	BPLAN_114	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	50S ribosomal protein L33; COG0267; Belongs to the bacterial ribosomal protein bL33 family.	0.989
rplQ	rpsC	BPLAN_373	BPLAN_393	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	Putative 30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.995
rplQ	rpsE	BPLAN_373	BPLAN_382	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.	0.996
rplQ	rpsH	BPLAN_373	BPLAN_385	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.996
rplQ	rpsJ	BPLAN_373	BPLAN_400	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.995
rplQ	rpsK	BPLAN_373	BPLAN_376	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.	0.998
rplQ	rpsR	BPLAN_373	BPLAN_302	Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.990

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