Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
BPLAN_116Uncharacterized conserved protein; COG0217. (238 aa)    
Predicted Functional Partners:
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.
  
   0.705
rpmG
50S ribosomal protein L33; COG0267; Belongs to the bacterial ribosomal protein bL33 family.
  
   0.678
rplQ
Putative 50S ribosomal protein L17; COG0203; Belongs to the bacterial ribosomal protein bL17 family.
  
   0.660
rpmA
Ribosomal protein L27; COG0211; Belongs to the bacterial ribosomal protein bL27 family.
  
   0.630
rpmB
50S ribosomal protein L28; COG0227; Belongs to the bacterial ribosomal protein bL28 family.
  
    0.580
BPLAN_113
Conserved hypothetical protein.
       0.543
rpmF
50S ribosomal protein L32; COG0333; Belongs to the bacterial ribosomal protein bL32 family.
   
   0.540
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
  
   0.532
ftsY
Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).
       0.528
thrA
Aspartokinase/homoserine dehydrogenase; COG0527.
  
    0.515
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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