STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPLAN_121Conserved hypothetical protein. (138 aa)    
Predicted Functional Partners:
BPLAN_019
Conserved hypothetical protein.
  
     0.731
feoA
Ferrous iron transport protein A; COG1918.
  
     0.699
BPLAN_250
Conserved hypothetical protein.
  
     0.698
BPLAN_221
Conserved hypothetical protein.
 
     0.624
prfA
Peptide chain release factor 1; COG0216; Protein involved in translational termination.
       0.611
BPLAN_165
Putative helicase; COG1074.
  
     0.579
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.
       0.569
BPLAN_545
Conserved hypothetical protein.
  
     0.561
BPLAN_272
Phosphate sodium symporter; COG0306.
  
     0.549
BPLAN_027
Conserved hypothetical protein.
  
     0.520
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.