STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPLAN_189Conserved hypothetical protein; COG1512. (247 aa)    
Predicted Functional Partners:
BPLAN_188
Putative LemA family protein; COG1704.
 
    0.935
BPLAN_058
COG3474.
    
   0.622
BPLAN_061
Conserved hypothetical protein; COG0436.
    
   0.622
BPLAN_062
Conserved hypothetical protein; COG2010.
    
   0.622
ccoP
ccoP cytochrome c oxidase, cbb3-type, subunit III; COG2010.
    
   0.622
ndk
Nucleoside-diphosphate kinase; COG0105.
  
    0.548
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.