Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BPLAN_221Conserved hypothetical protein. (601 aa)    
Predicted Functional Partners:
BPLAN_314
Conserved hypothetical protein.
  
  
 0.941
ompA
Outer membrane protein; COG0805.
  
  
 0.888
BPLAN_015
Conserved hypothetical protein; COG1452.
  
  
  0.859
ccoH
Cytochrome cbb3 oxidase maturation protein CcoH; COG0550.
 
     0.792
BPLAN_013
Conserved hypothetical protein; COG1452.
  
  
  0.780
BPLAN_027
Conserved hypothetical protein.
  
     0.774
BPLAN_019
Conserved hypothetical protein.
  
     0.763
BPLAN_046
Membrane protein; COG0457.
  
     0.757
ppiD
Peptidylprolyl cis-trans isomerase; COG0760.
  
     0.757
BPLAN_545
Conserved hypothetical protein.
  
     0.755
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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