STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpePutative ribulose-phosphate 3-epimerase; COG0036; Protein involved in pentose-phosphate shunt; Belongs to the ribulose-phosphate 3-epimerase family. (220 aa)    
Predicted Functional Partners:
BPLAN_239
Transketolase, N-terminal subunit; COG0691.
  
 0.991
BPLAN_238
Transketolase, C-terminal subunit; COG3959.
 
 
 0.925
rpiB
Ribose 5-phosphate isomerase B; COG0698.
  
 
 0.923
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.
       0.704
metK
S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
 
 
 
 0.628
fabI
Enoyl-[acyl-carrier-protein] reductase (NADH); COG0623.
       0.594
ahpC
Alkyl hydroperoxide reductase, subunit C; COG0450; Protein involved in peroxiredoxin activity.
   
   0.521
guaA
Bifunctional GMP synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP.
  
  
 0.513
BPLAN_290
Putative 2-methylthioadenine synthetase; COG0621.
  
    0.511
BPLAN_296
Phospho-2-dehydro-3-deoxyheptonate aldolase (aroG)/chorismate mutase (pheA); COG2876; Protein involved in chorismate biosynthetic process.
       0.507
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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