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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BPLAN_490Phosphoserine aminotransferase; COG1879. (353 aa)    
Predicted Functional Partners:
luxE
LuxE family acyl-protein synthetase/acyl-CoA reductase-like protein.
 
 
 0.893
BPLAN_270
Conserved hypothetical protein.
  
     0.765
sucA
2-oxoglutarate dehydrogenase E1 component; COG0022.
 
  
 0.688
serA
Putative phosphoglycerate dehydrogenase; COG0111; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 0.686
speA
Arginine decarboxylase; COG1166.
  
     0.646
BPLAN_526
Putative auxin-regulated protein.
 
 
 0.642
BPLAN_489
4Fe-4S ferredoxin, iron-sulfur binding protein; COG1145.
  
  
 0.623
BPLAN_350
uroporphyrinogen-III synthase; COG1587.
  
     0.601
BPLAN_436
Conserved hypothetical protein.
  
     0.575
maeB
Putative NADP-dependent malic enzyme; COG0281; Protein involved in phosphate acetyltransferase activity.
  
  
 0.549
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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