STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sufEPutative SufE Fe/S-cluster-related protein; COG2166. (148 aa)    
Predicted Functional Partners:
sufS
COG0520; Protein involved in cysteine desulfurase activity; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.827
sad
Succinate-semialdehyde dehydrogenase; COG1012; Protein involved in oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor.
       0.631
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
       0.615
sufC
FeS assembly ATPase SufC; COG0396; Protein involved in iron-sulfur cluster assembly.
  
   0.492
BPLAN_522
Putative sugar phosphate nucleotidyl transferase; COG1208.
       0.431
rpmE2
50S ribosomal protein L31; COG0254.
       0.431
fabH
3-oxoacyl-[acyl-carrier-protein] synthase III; COG0332.
       0.431
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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