Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BPLAN_169 | ahpC | BPLAN_169 | BPLAN_291 | Thioredoxin; COG0526. | Alkyl hydroperoxide reductase, subunit C; COG0450; Protein involved in peroxiredoxin activity. | 0.971 |
| BPLAN_169 | trxB | BPLAN_169 | BPLAN_588 | Thioredoxin; COG0526. | Thioredoxin reductase; COG0492; Protein involved in oxidation reduction. | 0.757 |
| BPLAN_589 | glyS | BPLAN_589 | BPLAN_587 | Conserved hypothetical protein; COG1091. | glycyl-tRNA synthetase; COG0423. | 0.529 |
| BPLAN_589 | trxB | BPLAN_589 | BPLAN_588 | Conserved hypothetical protein; COG1091. | Thioredoxin reductase; COG0492; Protein involved in oxidation reduction. | 0.555 |
| ahpC | BPLAN_169 | BPLAN_291 | BPLAN_169 | Alkyl hydroperoxide reductase, subunit C; COG0450; Protein involved in peroxiredoxin activity. | Thioredoxin; COG0526. | 0.971 |
| ahpC | guaB | BPLAN_291 | BPLAN_474 | Alkyl hydroperoxide reductase, subunit C; COG0450; Protein involved in peroxiredoxin activity. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.554 |
| ahpC | trxA | BPLAN_291 | BPLAN_319 | Alkyl hydroperoxide reductase, subunit C; COG0450; Protein involved in peroxiredoxin activity. | Thioredoxin; COG0526; Protein involved in oxidation reduction; Belongs to the thioredoxin family. | 0.640 |
| ahpC | trxB | BPLAN_291 | BPLAN_588 | Alkyl hydroperoxide reductase, subunit C; COG0450; Protein involved in peroxiredoxin activity. | Thioredoxin reductase; COG0492; Protein involved in oxidation reduction. | 0.872 |
| glyS | BPLAN_589 | BPLAN_587 | BPLAN_589 | glycyl-tRNA synthetase; COG0423. | Conserved hypothetical protein; COG1091. | 0.529 |
| glyS | guaB | BPLAN_587 | BPLAN_474 | glycyl-tRNA synthetase; COG0423. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.477 |
| glyS | trxB | BPLAN_587 | BPLAN_588 | glycyl-tRNA synthetase; COG0423. | Thioredoxin reductase; COG0492; Protein involved in oxidation reduction. | 0.744 |
| guaB | ahpC | BPLAN_474 | BPLAN_291 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Alkyl hydroperoxide reductase, subunit C; COG0450; Protein involved in peroxiredoxin activity. | 0.554 |
| guaB | glyS | BPLAN_474 | BPLAN_587 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | glycyl-tRNA synthetase; COG0423. | 0.477 |
| guaB | lpxC | BPLAN_474 | BPLAN_596 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. | 0.619 |
| guaB | secD | BPLAN_474 | BPLAN_539 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Bifunctional-export transmembrane SecDF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.656 |
| guaB | thrA | BPLAN_474 | BPLAN_138 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Aspartokinase/homoserine dehydrogenase; COG0527. | 0.709 |
| guaB | trxB | BPLAN_474 | BPLAN_588 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | Thioredoxin reductase; COG0492; Protein involved in oxidation reduction. | 0.486 |
| lpxC | guaB | BPLAN_596 | BPLAN_474 | UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.619 |
| lpxC | secD | BPLAN_596 | BPLAN_539 | UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. | Bifunctional-export transmembrane SecDF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.465 |
| lpxC | thrA | BPLAN_596 | BPLAN_138 | UDP-3-O-acyl-N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis. | Aspartokinase/homoserine dehydrogenase; COG0527. | 0.434 |
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