STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolEPutative lipoprotein releasing system transmembrane protein; COG4591. (396 aa)    
Predicted Functional Partners:
BPLAN_477
Putative ABC transporter, permease component; COG4591.
  
  
  0.974
nfsA
Ribosome-binding factor A; COG0858.
       0.786
BPLAN_546
Outer membrane protein; COG4775.
 
     0.748
BPLAN_091
Signal peptidase I; COG0681; Protein involved in protein secretion; Belongs to the peptidase S26 family.
  
    0.639
ompA
Outer membrane protein; COG0805.
  
 
   0.522
BPLAN_168
Conserved hypothetical protein; COG1579.
  
     0.495
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
 
     0.440
ftsQ
Cell division protein FtsQ.
  
     0.422
BPLAN_009
Putative exported peptidyl-prolyl cis-trans isomerase; COG0760.
  
     0.421
BPLAN_316
Conserved hypothetical protein; COG0795.
  
     0.420
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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