Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sufDCysteine desulfurase activator complex subunit SufD; COG0719; Protein involved in iron-sulfur cluster assembly. (432 aa)    
Predicted Functional Partners:
sufC
FeS assembly ATPase SufC; COG0396; Protein involved in iron-sulfur cluster assembly.
 
 0.998
sufB
Cysteine desulfurase activator complex subunit SufB; COG0719; Protein involved in iron-sulfur cluster assembly.
 
 
 
0.956
sufS
COG0520; Protein involved in cysteine desulfurase activity; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.932
sufA
FeS assembly scaffold SufA; COG0316; Protein involved in iron-sulfur cluster assembly; Belongs to the HesB/IscA family.
  
 0.797
rpmA
Ribosomal protein L27; COG0211; Belongs to the bacterial ribosomal protein bL27 family.
       0.746
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.
       0.746
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
 
     0.638
BPLAN_613
Secreted protein containing DUF192; COG1430.
       0.589
BPLAN_615
Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
       0.540
prfA
Peptide chain release factor 1; COG0216; Protein involved in translational termination.
     
  0.536
Your Current Organism:
Blattabacterium sp. BPLAN
NCBI taxonomy Id: 600809
Other names: B. sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) str. BPLAN, Blattabacterium sp. (Periplaneta americana) strain BPLAN
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