STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW04084.1Transcriptional regulator, BolA protein family; Belongs to the BolA/IbaG family. (85 aa)    
Predicted Functional Partners:
GrxD
Monothiol glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.876
SDW04119.1
DnaJ domain-containing protein.
   
 
 0.762
CobS
Cobaltochelatase CobS subunit.
 
     0.535
FtsW
Cell division protein FtsW; Belongs to the SEDS family.
      
 0.454
SDX46472.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
   
    0.435
SDW24802.1
Chaperone required for the assembly of the F1-ATPase.
  
    0.434
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.