STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW05940.1Hypothetical protein. (638 aa)    
Predicted Functional Partners:
PuuE
OHCU decarboxylase.
  
  
 0.896
SDX25948.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
    0.861
SDW09619.1
TPR repeat-containing protein.
 
 
 0.855
SDX28376.1
PAS domain-containing protein.
 
  
 0.832
DprA
DNA protecting protein DprA.
  
    0.831
SDX38534.1
Hypothetical protein.
  
 
 0.819
SDX66648.1
Sulfotransferase family protein.
  
 
 0.819
SDW70728.1
CHASE domain-containing protein.
  
  
 0.808
MotA
Chemotaxis protein MotA.
  
  
 0.783
SDW84523.1
Hypothetical protein.
  
 
 0.763
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.