STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW06571.1Hypothetical protein. (173 aa)    
Predicted Functional Partners:
glyQ
glycyl-tRNA synthetase alpha chain.
  
 
 0.995
glyS
glycyl-tRNA synthetase beta chain.
      0.889
SDW06654.1
Putative peptidoglycan binding domain-containing protein.
 
     0.882
SDW05848.1
Uncharacterized membrane protein.
  
     0.763
SDW05549.1
Hypothetical protein.
  
     0.737
SDW06492.1
Pyruvate phosphate dikinase.
  
    0.728
SDW41915.1
Invasion protein IalB, involved in pathogenesis.
  
    0.715
SDW50063.1
Hypothetical protein.
  
     0.710
SDW22769.1
OmpA-OmpF porin, OOP family.
 
     0.708
SDW21732.1
Hypothetical protein.
  
     0.701
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.