STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW07100.1Alkane 1-monooxygenase. (337 aa)    
Predicted Functional Partners:
SDX22219.1
Alkane 1-monooxygenase.
  
  
 
0.920
SDW17351.1
Zn-dependent alcohol dehydrogenase.
    
 0.903
SDW80859.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.903
SDW95850.1
S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.903
SDX19759.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
     
 0.901
SDX20997.1
Aldehyde dehydrogenase (NAD+).
     
 0.901
SDX38896.1
Aldehyde dehydrogenase (acceptor).
     
 0.901
SDW07144.1
Hypothetical protein.
       0.721
SDW40775.1
Hypothetical protein.
  
   
 0.668
SDW10489.1
Capsular polysaccharide export protein.
  
     0.597
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.