STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW11508.1Uncharacterized conserved protein, DUF983 family. (134 aa)    
Predicted Functional Partners:
SDW11554.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
 
     0.836
SDW11385.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
       0.621
SDW11456.1
Ca2+-binding protein, EF-hand superfamily.
       0.602
ctaG
Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
     0.598
SDW11299.1
Uncharacterized membrane protein.
       0.572
SDW11338.1
Hypothetical protein.
       0.572
SDW97867.1
Surfeit locus 1 family protein.
 
     0.529
SDW05848.1
Uncharacterized membrane protein.
  
     0.498
SDW46576.1
Protein of unknown function.
  
     0.471
SDX27503.1
HemY protein.
  
     0.471
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.