STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW14391.1Phage prohead protease, HK97 family/phage major capsid protein, HK97 family,TIGR01554. (687 aa)    
Predicted Functional Partners:
SDW14429.1
Phage portal protein, lambda family.
 
   
 0.952
SDW14512.1
Phage terminase, large subunit GpA.
 
   
 0.911
SDW13657.1
Hypothetical protein.
 
  
 0.829
SDW13771.1
Hypothetical protein.
 
  
 0.819
SDW13925.1
Phage tail-collar fibre protein.
 
 
 
 0.805
SDW14017.1
Phage-related baseplate assembly protein.
 
   
 0.800
SDW14053.1
Hypothetical protein.
 
     0.800
SDW13729.1
Hypothetical protein.
 
   
 0.795
SDW13970.1
Phage tail protein, P2 protein I family.
 
     0.789
SDW14473.1
Hypothetical protein.
       0.782
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.