Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RecN | SDW15260.1 | SAMN04488041_101148 | SAMN04488041_101411 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | AAA domain-containing protein. | 0.506 |
| RecN | SDX31485.1 | SAMN04488041_101148 | SAMN04488041_105427 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA repair exonuclease SbcCD nuclease subunit. | 0.482 |
| RecN | polA | SAMN04488041_101148 | SAMN04488041_105177 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.559 |
| RecN | recA | SAMN04488041_101148 | SAMN04488041_102386 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.921 |
| RecN | topA | SAMN04488041_101148 | SAMN04488041_10472 | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.535 |
| RecQ | SDW15260.1 | SAMN04488041_105186 | SAMN04488041_101411 | ATP-dependent DNA helicase RecQ. | AAA domain-containing protein. | 0.910 |
| RecQ | SDX31485.1 | SAMN04488041_105186 | SAMN04488041_105427 | ATP-dependent DNA helicase RecQ. | DNA repair exonuclease SbcCD nuclease subunit. | 0.944 |
| RecQ | polA | SAMN04488041_105186 | SAMN04488041_105177 | ATP-dependent DNA helicase RecQ. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.975 |
| RecQ | recA | SAMN04488041_105186 | SAMN04488041_102386 | ATP-dependent DNA helicase RecQ. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.925 |
| RecQ | topA | SAMN04488041_105186 | SAMN04488041_10472 | ATP-dependent DNA helicase RecQ. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.961 |
| SDW09794.1 | SDW15260.1 | SAMN04488041_101286 | SAMN04488041_101411 | DNA ligase-1. | AAA domain-containing protein. | 0.717 |
| SDW09794.1 | SDX31485.1 | SAMN04488041_101286 | SAMN04488041_105427 | DNA ligase-1. | DNA repair exonuclease SbcCD nuclease subunit. | 0.711 |
| SDW09794.1 | polA | SAMN04488041_101286 | SAMN04488041_105177 | DNA ligase-1. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.962 |
| SDW09794.1 | recA | SAMN04488041_101286 | SAMN04488041_102386 | DNA ligase-1. | Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.424 |
| SDW09794.1 | topA | SAMN04488041_101286 | SAMN04488041_10472 | DNA ligase-1. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.433 |
| SDW15260.1 | RecN | SAMN04488041_101411 | SAMN04488041_101148 | AAA domain-containing protein. | DNA replication and repair protein RecN; May be involved in recombinational repair of damaged DNA. | 0.506 |
| SDW15260.1 | RecQ | SAMN04488041_101411 | SAMN04488041_105186 | AAA domain-containing protein. | ATP-dependent DNA helicase RecQ. | 0.910 |
| SDW15260.1 | SDW09794.1 | SAMN04488041_101411 | SAMN04488041_101286 | AAA domain-containing protein. | DNA ligase-1. | 0.717 |
| SDW15260.1 | SDW15292.1 | SAMN04488041_101411 | SAMN04488041_101412 | AAA domain-containing protein. | Hypothetical protein. | 0.787 |
| SDW15260.1 | SDW15329.1 | SAMN04488041_101411 | SAMN04488041_101413 | AAA domain-containing protein. | Hypothetical protein. | 0.787 |
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