STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW18851.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
SDW18923.1
SAM-dependent methyltransferase, MidA family.
 
     0.780
PgeF
Conserved hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
       0.734
SDW18816.1
Hypothetical protein.
 
     0.684
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
 
     0.671
SDW40939.1
Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain.
  
     0.631
SDW47971.1
Disulfide bond formation protein DsbB.
 
     0.534
SDW71453.1
Uncharacterized protein, UPF0262 family; Belongs to the UPF0262 family.
  
     0.533
CobT
Cobaltochelatase CobT subunit.
  
     0.517
atpF-2
F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.502
SDW76826.1
SH3-like domain-containing protein.
  
     0.488
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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