STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW22103.1RND family efflux transporter, MFP subunit. (486 aa)    
Predicted Functional Partners:
SDW13070.1
Outer membrane protein.
  
 0.962
SDW22066.1
Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
   
 0.951
SDW96329.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.910
SDX36763.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.910
SDW96288.1
Multidrug efflux pump.
    
 0.909
SDX36736.1
Multidrug efflux pump.
    
 0.909
SDW96248.1
Outer membrane protein, multidrug efflux system.
  
 
 0.900
SDX23198.1
Putative ABC transport system ATP-binding protein.
  
 
 0.594
SDW81436.1
Outer membrane protein, adhesin transport system.
  
 
 0.569
SDX44966.1
Outer membrane protein TolC.
  
 
 0.569
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.