STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW22812.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
SDW22769.1
OmpA-OmpF porin, OOP family.
 
     0.930
SDW47444.1
Hypothetical protein.
  
     0.768
SDW21732.1
Hypothetical protein.
  
     0.767
SDW12993.1
Hypothetical protein.
  
     0.763
SDW44909.1
Hypothetical protein.
  
     0.760
ubiA
4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
       0.756
SDW16015.1
SseB protein N-terminal domain-containing protein.
  
     0.754
SDW40459.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB.
  
     0.750
SDW22634.1
Hypothetical protein.
 
     0.749
SDW18132.1
Hypothetical protein.
  
     0.742
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.