Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW40897.1 | SDW40939.1 | SAMN04488041_102108 | SAMN04488041_102109 | Hypothetical protein. | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | 0.635 |
SDW40897.1 | SDW40984.1 | SAMN04488041_102108 | SAMN04488041_102110 | Hypothetical protein. | Protein of unknown function. | 0.630 |
SDW40897.1 | SDW41067.1 | SAMN04488041_102108 | SAMN04488041_102112 | Hypothetical protein. | Hypothetical protein. | 0.427 |
SDW40897.1 | SDW84419.1 | SAMN04488041_102108 | SAMN04488041_103392 | Hypothetical protein. | Protein of unknown function. | 0.402 |
SDW40897.1 | SDW84459.1 | SAMN04488041_102108 | SAMN04488041_103393 | Hypothetical protein. | Protein of unknown function. | 0.444 |
SDW40897.1 | fumC | SAMN04488041_102108 | SAMN04488041_102111 | Hypothetical protein. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.631 |
SDW40897.1 | trpC | SAMN04488041_102108 | SAMN04488041_10118 | Hypothetical protein. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.499 |
SDW40897.1 | trpD | SAMN04488041_102108 | SAMN04488041_10116 | Hypothetical protein. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.499 |
SDW40939.1 | SDW40897.1 | SAMN04488041_102109 | SAMN04488041_102108 | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | Hypothetical protein. | 0.635 |
SDW40939.1 | SDW40984.1 | SAMN04488041_102109 | SAMN04488041_102110 | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | Protein of unknown function. | 0.867 |
SDW40939.1 | SDW41067.1 | SAMN04488041_102109 | SAMN04488041_102112 | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | Hypothetical protein. | 0.807 |
SDW40939.1 | fumC | SAMN04488041_102109 | SAMN04488041_102111 | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.867 |
SDW40984.1 | SDW40897.1 | SAMN04488041_102110 | SAMN04488041_102108 | Protein of unknown function. | Hypothetical protein. | 0.630 |
SDW40984.1 | SDW40939.1 | SAMN04488041_102110 | SAMN04488041_102109 | Protein of unknown function. | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | 0.867 |
SDW40984.1 | SDW41067.1 | SAMN04488041_102110 | SAMN04488041_102112 | Protein of unknown function. | Hypothetical protein. | 0.630 |
SDW40984.1 | fumC | SAMN04488041_102110 | SAMN04488041_102111 | Protein of unknown function. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.867 |
SDW41067.1 | SDW40897.1 | SAMN04488041_102112 | SAMN04488041_102108 | Hypothetical protein. | Hypothetical protein. | 0.427 |
SDW41067.1 | SDW40939.1 | SAMN04488041_102112 | SAMN04488041_102109 | Hypothetical protein. | Predicted DNA-binding protein, contains Ribbon-helix-helix (RHH) domain. | 0.807 |
SDW41067.1 | SDW40984.1 | SAMN04488041_102112 | SAMN04488041_102110 | Hypothetical protein. | Protein of unknown function. | 0.630 |
SDW41067.1 | fumC | SAMN04488041_102112 | SAMN04488041_102111 | Hypothetical protein. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.714 |
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