Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW37246.1 | SDW37278.1 | SAMN04488041_10214 | SAMN04488041_10215 | Predicted arabinose efflux permease, MFS family. | precorrin-6A reductase. | 0.627 |
SDW37246.1 | SDW37325.1 | SAMN04488041_10214 | SAMN04488041_10216 | Predicted arabinose efflux permease, MFS family. | DNA-3-methyladenine glycosylase II. | 0.831 |
SDW37246.1 | SDW37356.1 | SAMN04488041_10214 | SAMN04488041_10217 | Predicted arabinose efflux permease, MFS family. | Phospholipase/carboxylesterase. | 0.831 |
SDW37246.1 | ctaG | SAMN04488041_10214 | SAMN04488041_10466 | Predicted arabinose efflux permease, MFS family. | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | 0.437 |
SDW37278.1 | SDW37246.1 | SAMN04488041_10215 | SAMN04488041_10214 | precorrin-6A reductase. | Predicted arabinose efflux permease, MFS family. | 0.627 |
SDW37278.1 | SDW37325.1 | SAMN04488041_10215 | SAMN04488041_10216 | precorrin-6A reductase. | DNA-3-methyladenine glycosylase II. | 0.812 |
SDW37278.1 | SDW37356.1 | SAMN04488041_10215 | SAMN04488041_10217 | precorrin-6A reductase. | Phospholipase/carboxylesterase. | 0.812 |
SDW37325.1 | SDW37246.1 | SAMN04488041_10216 | SAMN04488041_10214 | DNA-3-methyladenine glycosylase II. | Predicted arabinose efflux permease, MFS family. | 0.831 |
SDW37325.1 | SDW37278.1 | SAMN04488041_10216 | SAMN04488041_10215 | DNA-3-methyladenine glycosylase II. | precorrin-6A reductase. | 0.812 |
SDW37325.1 | SDW37356.1 | SAMN04488041_10216 | SAMN04488041_10217 | DNA-3-methyladenine glycosylase II. | Phospholipase/carboxylesterase. | 0.914 |
SDW37356.1 | SDW37246.1 | SAMN04488041_10217 | SAMN04488041_10214 | Phospholipase/carboxylesterase. | Predicted arabinose efflux permease, MFS family. | 0.831 |
SDW37356.1 | SDW37278.1 | SAMN04488041_10217 | SAMN04488041_10215 | Phospholipase/carboxylesterase. | precorrin-6A reductase. | 0.812 |
SDW37356.1 | SDW37325.1 | SAMN04488041_10217 | SAMN04488041_10216 | Phospholipase/carboxylesterase. | DNA-3-methyladenine glycosylase II. | 0.914 |
ctaG | SDW37246.1 | SAMN04488041_10466 | SAMN04488041_10214 | Cytochrome c oxidase assembly protein subunit 11; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family. | Predicted arabinose efflux permease, MFS family. | 0.437 |