STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW42964.1Lyso-ornithine lipid acyltransferase. (284 aa)    
Predicted Functional Partners:
SDW42997.1
Ornithine-acyl[acyl carrier protein] N-acyltransferase.
 
  
 0.984
SDW38081.1
Ornithine-acyl[acyl carrier protein] N-acyltransferase.
 
  
 0.900
SDW43034.1
Protein of unknown function.
       0.724
SDW43070.1
Histidine phosphotransferase ChpT.
       0.643
SDW17628.1
Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.
 
    0.500
rpsB
SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family.
   
   0.497
SDW00742.1
Putative hemolysin.
  
  
 0.471
SDX49542.1
Putative hemolysin.
  
  
 0.471
PreA
Dihydrouracil dehydrogenase (NAD+).
  
    0.464
SDX11583.1
Transcriptional regulator, MarR family.
 
   
 0.442
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.