STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SufCFe-S cluster assembly ATP-binding protein. (251 aa)    
Predicted Functional Partners:
SDW50095.1
Iron-regulated ABC transporter permease protein SufD.
 
 
 0.999
SufB
Iron-regulated ABC transporter membrane component SufB.
 
 0.999
SDW49992.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.993
SDX26885.1
Selenocysteine lyase/Cysteine desulfurase.
 
  
 0.923
SDW50029.1
Yip1 domain-containing protein.
     
 0.913
SDW50063.1
Hypothetical protein.
     
 0.912
SDW46415.1
NifU homolog involved in Fe-S cluster formation.
  
  
 0.905
SDW52798.1
FeS assembly SUF system protein.
 
  
 0.846
SDW40153.1
Cysteine desulfuration protein SufE.
 
 
 0.846
SDW50289.1
Cysteine desulfurase.
  
  
 0.747
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.