STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW53021.1C4-dicarboxylate transporter, DctQ subunit. (226 aa)    
Predicted Functional Partners:
SDW52977.1
C4-dicarboxylate transporter, DctM subunit.
 
 0.996
SDW53064.1
C4-dicarboxylate-binding protein DctP.
 
 
 0.991
SDW53149.1
Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB.
 
  
  0.966
SDX22430.1
Tripartite ATP-independent transporter, DctQ component.
  
  
 
0.907
SDX43589.1
TRAP-type C4-dicarboxylate transport system, small permease component.
     
  0.900
SDW53104.1
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD.
 
     0.496
SDX39992.1
Tripartite ATP-independent transporter solute receptor, DctP family.
 
  
 0.482
SDW18025.1
Sulfotransferase family protein.
  
     0.472
SDW07477.1
TRAP transporter, DctM subunit.
 
 
 0.458
SDW07562.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
  
 0.424
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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