STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW53851.1Xanthine dehydrogenase accessory factor. (322 aa)    
Predicted Functional Partners:
SDW53808.1
Molybdenum cofactor cytidylyltransferase.
 
   
 0.930
SDW53761.1
Carbon-monoxide dehydrogenase small subunit.
 
  
 0.902
SDW53680.1
Carbon-monoxide dehydrogenase medium subunit.
 
  
 0.818
SDW53720.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
 0.811
SDW12528.1
Carbon-monoxide dehydrogenase large subunit.
 
  
 0.771
SDW74376.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
  
 0.770
SDW80893.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
  
 0.767
SDW96668.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
  
 0.762
SDX36707.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
  
 0.736
SDW47615.1
CTP:molybdopterin cytidylyltransferase MocA.
 
     0.734
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.