STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW38559.1Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. (504 aa)    
Predicted Functional Partners:
SDW38525.1
Predicted dithiol-disulfide isomerase, DsbA family.
       0.812
SDW07057.1
Formate dehydrogenase.
    
 
 0.722
SDW38599.1
Transcriptional regulator, XRE family with cupin sensor.
  
    0.668
SDW17995.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.517
SDW72422.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.517
SDX35742.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.517
SDW38450.1
Glycerol-3-phosphate cytidylyltransferase.
       0.514
SDW02681.1
acetyl-CoA synthetase.
 
  
0.488
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
 
  
 0.467
SDW18398.1
propionyl-CoA synthetase.
 
  
0.439
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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