STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW55929.1Phage major capsid protein, HK97 family. (391 aa)    
Predicted Functional Partners:
SDW55968.1
Hypothetical protein.
  
 0.998
SDW56043.1
Phage portal protein, HK97 family.
 
 
 0.993
SDW55853.1
Head-tail adaptor.
 
 
 0.990
SDW55891.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
 0.987
SDW55774.1
Phage major tail protein, TP901-1 family.
 
 
 0.985
SDW55816.1
Protein of unknown function.
 
 
   0.985
SDW55573.1
Phage conserved hypothetical protein BR0599.
 
 
 0.981
SDW55615.1
TIGR02217 family protein.
 
 
 
 0.981
SDW55654.1
Hypothetical protein.
 
    0.919
SDW55737.1
Phage tail tube protein, GTA-gp10.
 
    0.918
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: high (82%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.