STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW60600.1Hypothetical protein. (222 aa)    
Predicted Functional Partners:
SDW60475.1
Hypothetical protein.
       0.773
SDW60518.1
P2-like prophage tail protein X.
       0.773
SDW60557.1
Hypothetical protein.
       0.773
SDW60635.1
Hypothetical protein.
       0.773
SDW60436.1
Phage tail tape measure protein, TP901 family, core region.
       0.671
SDW60684.1
TIGR02594 family protein.
       0.558
SDW60729.1
Hypothetical protein.
       0.558
SDW60762.1
Hypothetical protein.
       0.558
SDW60394.1
Hypothetical protein.
       0.489
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.