STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW73978.1PAS domain S-box-containing protein. (485 aa)    
Predicted Functional Partners:
SDX23796.1
Hypothetical protein.
 
 
 0.974
SDX06467.1
PAS/PAC sensor hybrid histidine kinase.
 
 0.944
SDW57706.1
MHYT domain-containing protein, NO-binding membrane sensor.
 
 
 0.908
SDW73944.1
Circadian clock protein KaiC.
 
     0.907
SDX19071.1
Hypothetical protein.
 
 
 0.880
SDW70728.1
CHASE domain-containing protein.
 
 
 0.861
SDW74018.1
Response regulator receiver domain-containing protein.
 
 
 0.846
SDX39515.1
PAS/PAC sensor signal transduction histidine kinase.
 
 0.845
SDX09366.1
Two-component sensor histidine kinase, contains HisKA and HATPase domains.
   
 0.831
SDX45432.1
Histidine kinase.
 
 0.818
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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