STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW74194.1Putative Holin-X, holin superfamily III. (132 aa)    
Predicted Functional Partners:
SDW74149.1
Hypothetical protein.
 
     0.968
SDW74238.1
Protein of unknown function.
 
     0.968
SDX26692.1
DUF883 domain-containing protein; Membrane-anchored ribosome-binding protein, inhibits growth in stationary phase, ElaB/YqjD/DUF883 family.
  
  
 0.778
SDX10057.1
Protein of unknown function.
  
     0.645
SDX26820.1
Membrane protein.
 
     0.564
SDW48304.1
Osmotically inducible protein OsmC.
  
    0.413
SDW11995.1
GAF sensor signal transduction histidine kinase.
  
     0.411
SDW07456.1
Predicted PurR-regulated permease PerM.
 
     0.405
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.