STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW75838.1Hypothetical protein. (97 aa)    
Predicted Functional Partners:
SDW75893.1
Protein of unknown function.
 
     0.948
SDW75455.1
Protein of unknown function.
 
    0.879
SDW75376.1
Protein of unknown function.
 
    0.876
SDW76010.1
Mu-like prophage FluMu protein gp28.
 
     0.868
SDW75117.1
AAA domain-containing protein.
 
    0.862
SDW75205.1
Hypothetical protein.
 
     0.860
SDW75155.1
Hypothetical protein.
 
     0.842
SDW76130.1
Phage Mu protein F like protein.
 
     0.839
SDW76090.1
Mu-like prophage protein gp29.
 
     0.833
SDW75633.1
N-acetylmuramoyl-L-alanine amidase.
 
     0.832
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.