STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW77810.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
SDW77847.1
Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.
       0.728
SDX23727.1
N-terminal double-transmembrane domain-containing protein.
  
     0.688
SDW44155.1
DNA polymerase III, chi subunit.
  
     0.630
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.571
AddA
DNA helicase/exodeoxyribonuclease V, subunit A; Belongs to the helicase family. UvrD subfamily.
  
     0.522
SDX23763.1
Hypothetical protein.
  
     0.476
SDW11554.1
8-oxo-dGTP pyrophosphatase MutT, NUDIX family.
  
     0.472
SDW37202.1
Squalene/phytoene synthase.
  
     0.450
SDW10130.1
Hypothetical protein.
  
     0.449
SDX22248.1
Modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.449
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.