STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW79434.1Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (376 aa)    
Predicted Functional Partners:
SDW79498.1
TRAP transporter, DctM subunit.
 
 
 0.989
SDW79466.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.904
SDW79528.1
Amidase.
 
  
 0.853
SDX47051.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.742
SDX47084.1
TRAP transporter, DctM subunit.
 
  
 0.717
SDX07577.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
    0.674
SDX71274.1
Tripartite ATP-independent transporter, DctM component.
 
  
 0.633
SDW79612.1
Lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.624
SDX56675.1
TRAP transporter, DctM subunit.
 
  
 0.553
SDW79567.1
Hypothetical protein.
       0.547
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.