STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW79963.1Conserved repeat domain-containing protein. (1955 aa)    
Predicted Functional Partners:
SDW81391.1
Ig-like domain (group 3).
     
  0.900
SDX20362.1
Conserved repeat domain-containing protein.
 
  
 0.783
SDX20411.1
Hypothetical protein.
 
     0.777
SDX20334.1
Conserved repeat domain-containing protein.
  
     0.773
SDX21361.1
DNA translocase FtsK.
   
 
 0.629
SDX59023.1
Hypothetical protein.
  
     0.628
SDX43335.1
General secretion pathway protein K.
  
     0.482
SDX53140.1
Glycosyl transferases group 1.
  
  
 0.481
SDX58253.1
Antitoxin PrlF.
  
   
 0.476
SDW79991.1
Threonine kinase.
       0.475
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.