STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW71119.1Hemin uptake protein HemP. (54 aa)    
Predicted Functional Partners:
SDW71081.1
Hypothetical protein.
 
    0.970
SDW71038.1
Catecholate siderophore receptor.
  
  
 0.572
SDX21946.1
Hypothetical protein.
  
     0.476
SDW21058.1
Hypothetical protein.
  
     0.473
SDW71000.1
PKHD-type hydroxylase.
  
  
 0.462
SDX36967.1
Putative iron-regulated protein.
 
   
 0.448
ExbD
Outer membrane transport energization protein ExbD.
  
    0.445
ExbB
Outer membrane transport energization protein ExbB.
  
  
 0.445
SDX44819.1
Putative hemin transport protein.
 
  
 0.434
SDW70881.1
Outer membrane transport energization protein TonB.
  
    0.421
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.