STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW86954.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (315 aa)    
Predicted Functional Partners:
SDW86988.1
Transcriptional regulator, AraC family.
 
   
 0.832
SDW69623.1
Protein of unknown function.
  
    0.713
SDW87026.1
Zinc-binding dehydrogenase.
  
   0.518
SDW69893.1
NADPH2:quinone reductase.
  
   0.504
SDW05250.1
YHYH protein.
  
 
 0.489
FabD
[acyl-carrier-protein] S-malonyltransferase.
  
 
 0.442
SDW79853.1
Lactoylglutathione lyase family protein.
 
  
 0.429
SDW80666.1
Arylsulfatase A.
   
 
 0.424
SDW96094.1
NAD(P)H dehydrogenase (quinone).
 
 
 0.424
BetC
Choline-sulfatase.
   
 
 0.405
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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