STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fur-2Fur family transcriptional regulator, ferric uptake regulator; Belongs to the Fur family. (136 aa)    
Predicted Functional Partners:
SDW87617.1
Manganese/iron transport system ATP-binding protein.
  
  
 0.731
SDW87582.1
Manganese/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.
 
  
 0.720
SDW87695.1
Manganese/iron transport system permease protein.
 
  
 0.703
SDW87654.1
Manganese/iron transport system permease protein.
 
  
 0.696
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.645
SDW85264.1
Phasin protein.
      
 0.631
PhaR
Polyhydroxyalkanoate synthesis repressor PhaR.
      
 0.631
SDX20970.1
1-Cys peroxiredoxin.
  
  
 0.582
TrxA-2
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.577
GltB
Glutamate synthase (NADPH) large subunit.
     
 0.507
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.